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yozK [2018-08-12 18:50:38]
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yozK [2018-08-12 18:50:38]

N-terminal fragment of the Y family DNA polymerase YozK-YobH
locus
BSU18940
pI
8.20
mw
12.84 kDa
protein length
115 aa Sequence Blast
gene length
345 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProt

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.6|DNA repair/ recombination/ based on similarity]

    • The protein

    Protein family

  • DNA polymerase type-Y family

    • Expression and Regulation

    Operons

    genes
    [gene|94F2146AC6998CC77CD2E86CE8BE8DC98AEBB9CD|yozL]-[gene|A04F698C8836E84991BC875BCB7B1460D8E74A8E|yozK]-[gene|ED0A85A8A5FCD12C99507EB033F88586521A7C47|yobH]
    description
    [Pubmed|16267290]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

    • regulation

  • expression during spore [SW|germination] is strongly reduced under conditions of osmotic stress [Pubmed|27766092]
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    Biological materials

    Mutant

  • MGNA-B409 (yozK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1408 NBRP B. subtilis, Japan]
  • BKE18940 (Δ[gene|A04F698C8836E84991BC875BCB7B1460D8E74A8E|yozK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTCTCACGTGGAAATTGTG, downstream forward: _UP4_TAATCTTTTTTAGATGCAGG
  • BKK18940 (Δ[gene|A04F698C8836E84991BC875BCB7B1460D8E74A8E|yozK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATTCTCACGTGGAAATTGTG, downstream forward: _UP4_TAATCTTTTTTAGATGCAGG

    • References

  • 16267290,27766092